Publications


Harnessing the microbiome to control plant parasitic weeds
Masteling, R. | Lombard, L. | de Boer, W. | Raaijmakers, J.M. | Dini-Andreote, F. 2019 Current Opinion in Microbiology

Impacts of long-term plant residue management on soil organic matter quality, Pseudomonas community structure and disease suppressiveness
Dignam, B.E.A. | O'Callaghan, M. | Condron, L.M. | Raaijmakers, J.M. | Kowalchuk, G.A. | Wakelin, S.A. 2019 Soil Biology and Biochemistry

Volatiles of pathogenic and non-pathogenic soil-borne fungi affect plant development and resistance to insects
Moisan, K. | Cordovez, V. | van de Zande, E.M. | Raaijmakers, J.M. | Dicke, M. | Lucas-Barbosa, D. 2019 Oecologia

Resistance Breeding of Common Bean Shapes the Physiology of the Rhizosphere Microbiome
Mendes, L.W. | de Chaves, M.G. | Fonseca, M.D.C. | Mendes, R. | Raaijmakers, J.M. | Tsai, S.M. 2019 Frontiers in Microbiology

Deciphering rhizosphere microbiome assembly of wild and modern common bean (Phaseolus vulgaris) in native and agricultural soils from Colombia
Pérez-Jaramillo, J.E. | De Hollander, M. | Ramírez, C.A. | Mendes, R. | Raaijmakers, J.M. | Carrión, V.J. 2019 Microbiome

Breeding for soil-borne pathogen resistance impacts active rhizosphere microbiome of common bean
Mendes, L.W. | Mendes, R. | Raaijmakers, J.M. | Tsai, S.M. 2018 ISME Journal

Volatiles from soil-borne fungi affect directional growth of roots
Moisan, K. | Raaijmakers, J.M. | Dicke, M. | Lucas-Barbosa, D. | Cordovez, V. 2020 Plant Cell and Environment

Fungal volatiles influence plant defence against above-ground and below-ground herbivory
Moisan, K. | Aragón, M. | Gort, G. | Dicke, M. | Cordovez, V. | Raaijmakers, J.M. | Lucas-Barbosa, D. 2020 Functional Ecology

Production of ammonia as a low-cost and long-distance antibiotic strategy by Streptomyces species
Avalos, M. | Garbeva, P. | Raaijmakers, J.M. | van Wezel, G.P. 2020 ISME Journal

Volatiles from the fungus Fusarium oxysporum affect interactions of Brassica rapa plants with root herbivores
Moisan, K. | Dicke, M. | Raaijmakers, J.M. | Rachmawati, E. | Cordovez, V. 2020 Ecological Entomology

Microbial and volatile profiling of soils suppressive to Fusarium culmorum of wheat
Ossowicki, A. | Tracanna, V. | Petrus, M.L.C. | van Wezel, G. | Raaijmakers, J.M. | Medema, M.H. | Garbeva, P. 2020 Proceedings of the Royal Society B: Biological Sciences

Multitrophic interactions in the rhizosphere microbiome of wheat: From bacteria and fungi to protists
Rossmann, M. | Pérez-Jaramillo, J.E. | Kavamura, V.N. | Chiaramonte, J.B. | Dumack, K. | Fiore-Donno, A.M. | Mendes, L.W. | Ferreira, M.M.C. | Bonkowski, M. | Raaijmakers, J.M. | Mauchline, T.H. | Mendes, R. 2020 FEMS Microbiology Ecology

DiSCount: Computer vision for automated quantification of Striga seed germination
Masteling, R. | Voorhoeve, L. | Ijsselmuiden, J. | Dini-Andreote, F. | De Boer, W. | Raaijmakers, J.M. 2020 Plant Methods

Linking ecology and plant pathology to unravel the importance of soil-borne fungal pathogens in species-rich grasslands
Ampt, E.A. | van Ruijven, J. | Raaijmakers, J.M. | Termorshuizen, A.J. | Mommer, L. 2019 European Journal of Plant Pathology

Plant functional group drives the community structure of saprophytic fungi in a grassland biodiversity experiment
Francioli, D. | van Rijssel, S.Q. | van Ruijven, J. | Termorshuizen, A.J. | Cotton, T.E.A. | Dumbrell, A.J. | Raaijmakers, J.M. | Weigelt, A. | Mommer, L. 2020 Plant and Soil

Ecology and evolution of plant microbiomes
Cordovez, V. | Dini-Andreote, F. | Carrión, V.J. | Raaijmakers, J.M. 2019 Annual Review of Microbiology

Pathogen-induced activation of disease-suppressive functions in the endophytic root microbiome
Carrión, V.J. | Perez-Jaramillo, J. | Cordovez, V. | Tracanna, V. | De Hollander, M. | Ruiz-Buck, D. | Mendes, L.W. | van Ijcken, W.F.J. | Gomez-Exposito, R. | Elsayed, S.S. | Mohanraju, P. | Arifah, A. | van der Oost, J. | Paulson, J.N. | Mendes, R. | van Wezel, G.P. | Medema, M.H. | Raaijmakers, J.M. 2019 Science

Priming of plant growth promotion by volatiles of rootassociated Microbacterium spp.
Cordovez, V. | Schop, S. | Hordijk, K. | de Boulois, H.D. | Coppens, F. | Hanssen, I. | Raaijmakers, J.M. | Carrióna, V.J. 2018 Applied and Environmental Microbiology

No evidence of modulation of indirect plant resistance of Brassica rapa plants by volatiles from soil-borne fungi
Moisan, K. | Lucas-Barbosa, D. | Villela, A. | Greenberg, L.O. | Cordovez, V. | Raaijmakers, J.M. | Dicke, M. 2020 Ecological Entomology