The soil-plant-human gut microbiome axis into perspective
Ma H. 2025 Nature Communications
Unveiling diversity and adaptations of the wild tomato Microbiome in their center of origin in the Ecuadorian Andes
Flores S.S. 2025 Scientific Reports
Domesticated rice alters the rhizosphere microbiome, reducing nitrogen fixation and increasing nitrous oxide emissions
Chang J. 2025 Nature Communications
Born to rewild: Reconnecting beneficial plant-microbiome alliances for resilient future crops
Ramirez-Villacis D.X. 2025 Cell Host and Microbe
Exometabolome of Pantoea targets pathogen associated scytalone dehydratase and XopQ for suppression of foliar blast and bacterial blight in rice
Krishnappa C. 2025 International Journal of Biological Macromolecules
First Report of Rhizoctonia solani AG-3 Causing Black Scurf on Solanum tuberosum cv. Superchola in Cotopaxi, Ecuador
Peña-Zúñiga E. 2025 Plant Disease
Foliar infections by Botrytis cinerea modulate the tomato root volatilome and microbiome
Rizaludin M.S. 2025 FEMS Microbiology Ecology
Novel bacteriophages targeting wheat phyllosphere bacteria carry DNA modifications and single-strand breaks
Dougherty P.E. 2025 Virus Research
Harnessing the phyllosphere microbiota of wild foxtail millet for designing beneficial cross-kingdom synthetic communities
Zai X. 2025 Isme Communications
bacLIFE: a user-friendly computational workflow for genome analysis and prediction of lifestyle-associated genes in bacteria
Guerrero-Egido G. 2024 Nature Communications
C4 cereal and biofuel crop microbiomes
Zai X. 2024 Trends in Microbiology
Evaluating Mechanisms of Soil Microbiome Suppression of Striga Infection in Sorghum
Taylor T. 2024 Bio Protocol
Darwin’s expedition revisited to reveal the evolution of plant–microbe interactions on Galápagos
Cordovez V. 2024 Nature Microbiology
Impact of bacterial and fungal inoculants on the resident rhizosphere microbiome and the volatilome of tomato plants under leaf herbivory stress
Lee Díaz A.S. 2024 FEMS Microbiology Ecology
Strategies for tailoring functional microbial synthetic communities
Jing J. 2024 Isme Journal
The Tomato’s Tale: Exploring Taxonomy, Biogeography, Domestication, and Microbiome for Enhanced Resilience
Flores S.S. 2024 Phytobiomes Journal
Impact of the fungal pathogen Fusarium oxysporum on the taxonomic and functional diversity of the common bean root microbiome
Mendes L.W. 2023 Environmental Microbiome
Widespread and largely unknown prophage activity, diversity, and function in two genera of wheat phyllosphere bacteria
Dougherty P.E. 2023 Isme Journal
Repeated exposure of wheat to the fungal root pathogen Bipolaris sorokiniana modulates rhizosphere microbiome assembly and disease suppressiveness
Costa L.S.A.S. 2023 Environmental Microbiome
Diversity of viruses and viroids in the rhizosphere of common bean cultivars differing in resistance to the fungal root pathogen Fusarium oxysporum
Braga L.P.P. 2023 Applied Soil Ecology
Importance of Bacteroidetes in host–microbe interactions and ecosystem functioning
Pan X. 2023 Trends in Microbiology
baseLess: lightweight detection of sequences in raw MinION data
Noordijk B. 2023 Bioinformatics Advances
